methanobacterium formicicum Search Results


aspergillus kawachii ifo4308 baa19913  (ATCC)
90
ATCC aspergillus kawachii ifo4308 baa19913
Aspergillus Kawachii Ifo4308 Baa19913, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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lytic phages drs3 infecting methanobacterium formicicum  (ATCC)
90
ATCC lytic phages drs3 infecting methanobacterium formicicum
Archaeal genomes from the human gut microbiome distribution and the corresponding unified protein catalogue. Note: Methanobrevibacter smithii _A is later referred to as Cand . M. intestini. A) Worldwide distribution of the archaeal genomes, colored according to abundance (white indicates data not available). Barplot representing B) the overall proportion of taxa and C) the number per country, of the archaeal genomes isolated from the human gut. D) Unified human archaeal protein catalogue based on the inter-species pan-genome of all 1,167 archaeal genomes. Heatmap depicts the presence of 3,050 proteins (found in more than 50 genomes, columns) across the 1,167 archaeal genomes (rows). E) The taxonomic distinction of Methanomassiliicoccales, Halobacteriales and Methanobacteriales based on the protein profile , displayed in a PCoA plot based on Bray-Curtis distances at a depth of 623 archaeal proteins. The PCoA showed five distinct clusters referring to Methanomethylophilaceae, Methanomassiliicoccus , Methanocorpusculum , Methanosphaera and Methanobacteriaceae . Notably, the clade of Methanobacteriaceae was subdivided into <t>Methanobacterium</t> and a heterogeneous cluster of Methanobrevibacter ( F ).
Lytic Phages Drs3 Infecting Methanobacterium Formicicum, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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methanobacterium formicicum  (DSMZ)
93
DSMZ methanobacterium formicicum
Archaeal genomes from the human gut microbiome distribution and the corresponding unified protein catalogue. Note: Methanobrevibacter smithii _A is later referred to as Cand . M. intestini. A) Worldwide distribution of the archaeal genomes, colored according to abundance (white indicates data not available). Barplot representing B) the overall proportion of taxa and C) the number per country, of the archaeal genomes isolated from the human gut. D) Unified human archaeal protein catalogue based on the inter-species pan-genome of all 1,167 archaeal genomes. Heatmap depicts the presence of 3,050 proteins (found in more than 50 genomes, columns) across the 1,167 archaeal genomes (rows). E) The taxonomic distinction of Methanomassiliicoccales, Halobacteriales and Methanobacteriales based on the protein profile , displayed in a PCoA plot based on Bray-Curtis distances at a depth of 623 archaeal proteins. The PCoA showed five distinct clusters referring to Methanomethylophilaceae, Methanomassiliicoccus , Methanocorpusculum , Methanosphaera and Methanobacteriaceae . Notably, the clade of Methanobacteriaceae was subdivided into <t>Methanobacterium</t> and a heterogeneous cluster of Methanobrevibacter ( F ).
Methanobacterium Formicicum, supplied by DSMZ, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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oxa 98  (ATCC)
90
ATCC oxa 98
Archaeal genomes from the human gut microbiome distribution and the corresponding unified protein catalogue. Note: Methanobrevibacter smithii _A is later referred to as Cand . M. intestini. A) Worldwide distribution of the archaeal genomes, colored according to abundance (white indicates data not available). Barplot representing B) the overall proportion of taxa and C) the number per country, of the archaeal genomes isolated from the human gut. D) Unified human archaeal protein catalogue based on the inter-species pan-genome of all 1,167 archaeal genomes. Heatmap depicts the presence of 3,050 proteins (found in more than 50 genomes, columns) across the 1,167 archaeal genomes (rows). E) The taxonomic distinction of Methanomassiliicoccales, Halobacteriales and Methanobacteriales based on the protein profile , displayed in a PCoA plot based on Bray-Curtis distances at a depth of 623 archaeal proteins. The PCoA showed five distinct clusters referring to Methanomethylophilaceae, Methanomassiliicoccus , Methanocorpusculum , Methanosphaera and Methanobacteriaceae . Notably, the clade of Methanobacteriaceae was subdivided into <t>Methanobacterium</t> and a heterogeneous cluster of Methanobrevibacter ( F ).
Oxa 98, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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methanobacterium formicicum brm9  (AgResearch)
90
AgResearch methanobacterium formicicum brm9
Microbial strains, plasmids and amplification oligonucleotides.
Methanobacterium Formicicum Brm9, supplied by AgResearch, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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methanobacterium formicicum  (Federation of European Neuroscience Societies)
90
Federation of European Neuroscience Societies methanobacterium formicicum
Microbial strains, plasmids and amplification oligonucleotides.
Methanobacterium Formicicum, supplied by Federation of European Neuroscience Societies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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methanobacterium formicicum dsm1535t  (Wageningen University and Research)
90
Wageningen University and Research methanobacterium formicicum dsm1535t
Microbial strains, plasmids and amplification oligonucleotides.
Methanobacterium Formicicum Dsm1535t, supplied by Wageningen University and Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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methanobacterium formicicum schnellen emend. judicial commission  (ATCC)
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Image Search Results


Archaeal genomes from the human gut microbiome distribution and the corresponding unified protein catalogue. Note: Methanobrevibacter smithii _A is later referred to as Cand . M. intestini. A) Worldwide distribution of the archaeal genomes, colored according to abundance (white indicates data not available). Barplot representing B) the overall proportion of taxa and C) the number per country, of the archaeal genomes isolated from the human gut. D) Unified human archaeal protein catalogue based on the inter-species pan-genome of all 1,167 archaeal genomes. Heatmap depicts the presence of 3,050 proteins (found in more than 50 genomes, columns) across the 1,167 archaeal genomes (rows). E) The taxonomic distinction of Methanomassiliicoccales, Halobacteriales and Methanobacteriales based on the protein profile , displayed in a PCoA plot based on Bray-Curtis distances at a depth of 623 archaeal proteins. The PCoA showed five distinct clusters referring to Methanomethylophilaceae, Methanomassiliicoccus , Methanocorpusculum , Methanosphaera and Methanobacteriaceae . Notably, the clade of Methanobacteriaceae was subdivided into Methanobacterium and a heterogeneous cluster of Methanobrevibacter ( F ).

Journal: bioRxiv

Article Title: A comprehensive analysis of the global human gut archaeome from a thousand genome catalogue

doi: 10.1101/2020.11.21.392621

Figure Lengend Snippet: Archaeal genomes from the human gut microbiome distribution and the corresponding unified protein catalogue. Note: Methanobrevibacter smithii _A is later referred to as Cand . M. intestini. A) Worldwide distribution of the archaeal genomes, colored according to abundance (white indicates data not available). Barplot representing B) the overall proportion of taxa and C) the number per country, of the archaeal genomes isolated from the human gut. D) Unified human archaeal protein catalogue based on the inter-species pan-genome of all 1,167 archaeal genomes. Heatmap depicts the presence of 3,050 proteins (found in more than 50 genomes, columns) across the 1,167 archaeal genomes (rows). E) The taxonomic distinction of Methanomassiliicoccales, Halobacteriales and Methanobacteriales based on the protein profile , displayed in a PCoA plot based on Bray-Curtis distances at a depth of 623 archaeal proteins. The PCoA showed five distinct clusters referring to Methanomethylophilaceae, Methanomassiliicoccus , Methanocorpusculum , Methanosphaera and Methanobacteriaceae . Notably, the clade of Methanobacteriaceae was subdivided into Methanobacterium and a heterogeneous cluster of Methanobrevibacter ( F ).

Article Snippet: In more detail, we found no similarities between the identified proviruses and the lytic phages Drs3 infecting Methanobacterium formicicum , six viruses infecting various Halorubrum species , the provirus Msmi-Pro1 infecting Methanobrevibacter smithii ATCC 35061 ( ) and the provirus φmru infecting Methanobrevibacter ruminantium ( ).

Techniques: Isolation

Microbial strains, plasmids and amplification oligonucleotides.

Journal: Frontiers in Microbiology

Article Title: Inhibition of Rumen Methanogens by a Novel Archaeal Lytic Enzyme Displayed on Tailored Bionanoparticles

doi: 10.3389/fmicb.2018.02378

Figure Lengend Snippet: Microbial strains, plasmids and amplification oligonucleotides.

Article Snippet: Methanobacterium formicicum BRM9 , New Zealand bovine rumen isolate , ( ) PGgRc (b), NZAGRC (c) , AgResearch Ltd. .

Techniques: Amplification, Cloning, Control

Biological activity of PhaC-PeiR tailored BNPs against rumen methanogens. Graphs depict methane production in pure cultures. (A) 229/11, (B) AbM4, (C) D5, (D) A4, (E) BRM9, (F) CM1. Error bars represent the standard error from 4 repetitions. To avoid build-up of methane in the culture medium prior to BNP addition, beads were added at the time of culture inoculation ( t = 0 d). For CM1 and BRM9, methane was measured as a cumulative value over time due to low production. All other samples had their respective headspace flushed after sampling to remove any residual methane. BNPs were added at time t = 0 d for 229/11, AbM4, D5 and A4, and 2 days prior to methanogen cell inoculation for CM1 and BRM9 to allow for extended anoxic calibration.

Journal: Frontiers in Microbiology

Article Title: Inhibition of Rumen Methanogens by a Novel Archaeal Lytic Enzyme Displayed on Tailored Bionanoparticles

doi: 10.3389/fmicb.2018.02378

Figure Lengend Snippet: Biological activity of PhaC-PeiR tailored BNPs against rumen methanogens. Graphs depict methane production in pure cultures. (A) 229/11, (B) AbM4, (C) D5, (D) A4, (E) BRM9, (F) CM1. Error bars represent the standard error from 4 repetitions. To avoid build-up of methane in the culture medium prior to BNP addition, beads were added at the time of culture inoculation ( t = 0 d). For CM1 and BRM9, methane was measured as a cumulative value over time due to low production. All other samples had their respective headspace flushed after sampling to remove any residual methane. BNPs were added at time t = 0 d for 229/11, AbM4, D5 and A4, and 2 days prior to methanogen cell inoculation for CM1 and BRM9 to allow for extended anoxic calibration.

Article Snippet: Methanobacterium formicicum BRM9 , New Zealand bovine rumen isolate , ( ) PGgRc (b), NZAGRC (c) , AgResearch Ltd. .

Techniques: Activity Assay, Sampling